SNP Profiles of PA 66 [PER] View Data

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CG	AT	AC	GG	CT	AC	AA	CC	AT	AG	GG	AA	CC	GT
1._PA_66_[PER]	CG	AT	AC	GG	CT	AC	AA	CC	AT	AG	GG	AA	CC	GT
2._PA_66_[PER]	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
3._PA_66_[PER]	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
4._PA_66_[PER]	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
5._PA_66_[PER]	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
6._PA_66_[PER]	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
7._GC-08-286-8-58	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
8._GC-08-286-8-58	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
9._GC-08-286-8-58	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
10._GC-08-286-8-58	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT
11._GC-08-286-8-58	CG	AT	CC	GT	CT	AC	AA	CC	AT	GG	AG	AC	CC	GT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CG	AC	TT	AA	CT	CG	GG	CT	TT	CG	AA	TT	AA	CC
1._PA_66_[PER]	CG	AC	TT	AA	_	CG	_	CT	TT	CG	AA	TT	AA	CC
2._PA_66_[PER]	CG	CC	TT	AG	_	CG	_	CC	CT	GG	AA	CT	AG	CT
3._PA_66_[PER]	CG	CC	TT	AG	_	CG	_	CC	CT	GG	AA	CT	AG	CT
4._PA_66_[PER]	CG	CC	TT	AG	_	CG	_	CC	CT	GG	AA	CT	AG	CT
5._PA_66_[PER]	CG	CC	TT	AG	_	CG	_	CC	CT	GG	AA	CT	AG	CT
6._PA_66_[PER]	CG	CC	TT	AG	_	CG	_	CC	CT	GG	_	CT	AG	CT
7._GC-08-286-8-58	CG	CC	TT	AG	GG	CG	CC	CC	CT	GG	AA	CT	AG	CT
8._GC-08-286-8-58	CG	CC	TT	AG	GG	CG	CC	CC	CT	GG	AA	CT	AG	CT
9._GC-08-286-8-58	CG	CC	TT	AG	GG	CG	CC	CC	CT	GG	AA	CT	AG	CT
10._GC-08-286-8-58	CG	CC	TT	AG	GG	CG	CC	CC	CT	GG	AA	CT	AG	CT
11._GC-08-286-8-58	CG	CC	TT	AG	GG	CG	CC	CC	CT	GG	_	CT	AG	CT

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	GG	AA	CC	CT	TT	TT	CC	TT	CT	CG	AG	CC	X_X	X_X
1._PA_66_[PER]	GG	AA	CC	CT	TT	TT	CC	TT	CT	CG	AG	CC	X_X	X_X
2._PA_66_[PER]	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
3._PA_66_[PER]	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
4._PA_66_[PER]	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
5._PA_66_[PER]	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
6._PA_66_[PER]	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
7._GC-08-286-8-58	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
8._GC-08-286-8-58	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
9._GC-08-286-8-58	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
10._GC-08-286-8-58	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X
11._GC-08-286-8-58	AG	AA	TT	CC	GT	CC	AC	CT	CC	CG	AA	TT	X_X	X_X

Input profile: PA_66_[PER]

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER C 880

Dapeng Zhang, 2014

1._PA_66_[PER]

identical
38 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper C 880

Dapeng Zhang, 2016

2._PA_66_[PER]

65.8 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8858 2

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

3._PA_66_[PER]

65.8 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8858 3

Dapeng Zhang, 2016

4._PA_66_[PER]

65.8 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8858 4

Dapeng Zhang, 2016

5._PA_66_[PER]

65.8 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8858 7

Dapeng Zhang, 2016

6._PA_66_[PER]

64.9 %
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8858 6

Dapeng Zhang, 2016

7._PA_66_[PER] GC-08-286-8-58

62.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

8._PA_66_[PER] GC-08-286-8-58

62.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

9._PA_66_[PER] GC-08-286-8-58

62.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

10._PA_66_[PER] GC-08-286-8-58

62.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

11._PA_66_[PER] GC-08-286-8-58

61.5 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Key to SNP Markers

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP230	8	TcSNP242	9	TcSNP372	10	TcSNP429
11	TcSNP469	12	TcSNP529	13	TcSNP534	14	TcSNP560	15	TcSNP577
16	TcSNP591	17	TcSNP619	18	TcSNP645	19	TcSNP836	20	TcSNP872
21	TcSNP878	22	TcSNP891	23	TcSNP917	24	TcSNP929	25	TcSNP953
26	TcSNP994	27	TcSNP998	28	TcSNP1060	29	TcSNP1062	30	TcSNP1075
31	TcSNP1144	32	TcSNP1165	33	TcSNP1253	34	TcSNP1270	35	TcSNP1350
36	TcSNP1414	37	TcSNP1442	38	TcSNP1458	39	TcSNP1484	40	TcSNP1520